SchemaRefinery

Overview:

  • Overview
  • Installation Guide
  • Contact and Support

Modules:

  • DownloadAssemblies - Download assemblies and their metadata from specified databases
  • AdaptLoci - Adapt fastas into a chewBBACA schema
  • MatchSchemas - Match schemas in a directory
  • IdentifyParalogousLoci - Identify paralogous loci in a schema
  • IdentifySpuriousGenes - Identify spurious genes in a schema
  • SchemaAnnotation - Annotate schemas
  • ApplyRecommendations - Create a new schema based on recommendations

Tutorials:

  • Schema Refinery - Full Tutorial
  • DownloadAssemblies - Tutorial
  • AdaptLoci - Tutorial
  • MatchSchemas - Tutorial
  • IdentifyParalogousLoci - Tutorial
  • IdentifySpuriousGeneSchema - Tutorial
  • IdentifySpuriousGenesUnclassifiedCDS - Tutorial
  • SchemaAnnotation - Tutorial
  • ApplyRecommendations - Tutorial
SchemaRefinery
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